Author

Jia Yuan Zhu

The University of Western AustraliaORCID 0000-0002-7475-4273Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Synthetic Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:Arabidopsis· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Christian PfluegeriD· 3 shared Gabrielle HerringiD· 3 shared James P. B. LloydiD· 3 shared Ryan ListeriD· 3 shared Florence LyiD· 2 shared Harish Jadhav· 2 shared Patrick GongiD· 2 shared Tessa SwainiD· 2 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersSynthetic Biology

Christian PfluegerORCID

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Author profile →

3 papers

Recent·Most cited

Make it so: Rapid and affordable plasmid sequencing on ONT platforms with PICARD-seq

Rebecca Wolters, Johannes Wolfram JWD Debler, Gabriella Go, Anna Bond, Florence Ly, Cody Ryall, Jed Orrock, Nicolas Tabanera Valle, Bryony Hodge, Farley M. Kwok van der Giezen, Patrick Gong, Harish Jadhav, Mojtaba Bagherian, Zakia Thevarajoo, Adil Khan, , James P. B. Lloyd

PICARD-seq enables rapid, affordable whole-plasmid sequencing using nanopore technology, improving accuracy and resolving repetitive regions in synthetic constructs.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics

CREation of an expanded plant memory gene circuit toolkit

Patrick Gong, Muhammad Adil Khan, Florence Ly, Jia Yuan Zhu, Gabrielle Herring, Harish Jadhav, Christian Pflueger, James P. B. Lloyd, Ryan Lister

The paper identifies context-specific failures of the Cre recombinase in plant gene circuits and develops improved recombinase systems for stable memory functions.

bioRxiv · Oct 28, 2025 · PreprintSynthetic Biology

CRISPRi-based circuits for genetic computation in plants

Muhammad Adil Khan, Gabrielle Herring, Marina Oliva, Elliott Fourie, Jia Yuan Zhu, Benjamin Johnston, Jahnvi Pflueger, Tessa Swain, Christian Pflueger, James P. B. Lloyd, David Secco, Ian Small, Brendan N. Kidd, Ryan Lister

This paper develops CRISPRi-based gene circuits in Arabidopsis for implementing logic gates and modular control of gene expression.

bioRxiv · Jul 1, 2022 · PreprintSynthetic Biology