Author

Deirdre Ricaurte

Columbia UniversityORCID 0000-0002-7479-0821Unclaimed ORCID profile · follow to get notified of new preprints

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Deirdre Ricaurte1 paper

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

Florencia Velez‐CortesiD· 1 shared Guillaume UrtechoiD· 1 shared Harris H. WangiD· 1 shared Itsik Pe’eriD· 1 shared Jeongchan Lee· 1 shared Liyuan LiniD· 1 shared Miles RichardsoniD· 1 shared Philippe ChlenskiiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

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10 top collaborators · 29 mutual co-author links

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1 shared paperSystems Biology

Florencia Velez‐CortesORCID

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2 papers

Recent·Most cited

Systems BiologyNature MicrobiologyPeer-reviewedFeb 3, 2025

SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome

Miles Richardson, Shijie Zhao, Liyuan Lin…·Harris H. Wang

SAMPL-seq identifies spatial hubs in the human gut microbiome by sampling micron-scale sub-communities and analyzing microbial co-occurrence across individuals and time.

24 citationstop 2%

humanmetagenomics

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BioinformaticsbioRxivPreprintNov 7, 2023

Signals of microbial growth learned from single amplicon samples

Philippe Chlenski, Deirdre Ricaurte, Itsik Pe’er

The paper investigates coverage irregularities in 16S amplicon data to infer microbial growth dynamics, finding no correlation with WGS-based methods.

DOI 10.1101/2023.11.07.565791

metagenomicsstatistical model

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