Author

Joanne H. Reed

The University of SydneyORCID 0000-0002-7585-7848Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Assay:proteomics· 2 Research Focus:cell signaling & trafficking· 1 Approach:experimental assay· 1 Assay:flow cytometry· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Adrian Y. S. LeeiD· 1 shared Andrew R. LloydiD· 1 shared Ann‐Na ChoiD· 1 shared Artur ShvetcoviD· 1 shared Auda A. EltahlaiD· 1 shared Bo ShiiD· 1 shared Caitlin A. FinneyiD· 1 shared Ching‐Seng AngiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperImmunology

Adrian Y. S. LeeORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Apoptotic bodies from patients with Sjogren's disease drive atypical memory B cell and macrophage activation and autoantibody production

Adrian Y. S. Lee, Bo Shi, Sriram Gummadi, Pamali Fonseka, Tuong-Khanh My Tu, Quan Thinh Le, Ching‐Seng Ang, Tien K. Nguyen, Ming Wei Lin, Thanh Kha Phan, Joanne H. Reed

The paper compares apoptotic bodies from Sjogren's disease patients and healthy donors, showing they drive B cell and macrophage activation and autoantibody production.

bioRxiv · Jul 20, 2026 · PreprintImmunology

Cerebrospinal fluid proteome profiling using machine learning shows a unique protein signature associated with APOE4 genotype

Artur Shvetcov, Shannon Thomson, Ann‐Na Cho, Heather Wilkins, Joanne H. Reed, Russell Howard Swerdlow, David Alexander Brown, the Alzheimer’s Disease Neuroimaging Initiative, Caitlin A. Finney

This study identifies an APOE4-specific cerebrospinal fluid proteome signature using machine learning, independent of Alzheimer's disease diagnosis and associated with increased risk of cognitive impairment.

Aging Cell · Dec 25, 2024Peer-reviewedNeuroscience

B-cell receptor reconstruction from single-cell RNA-seq with VDJPuzzle

Simone Rizzetto, David Koppstein, Jerome Samir, Mandeep Singh, Joanne H. Reed, Curtis Cai, Andrew R. Lloyd, Auda A. Eltahla, Christopher Carl Goodnow, Fabio Luciani

VDJPuzzle 2.0 reconstructs full-length B-cell receptor sequences from scRNA-seq with high accuracy, validated against Sanger sequencing.

Bioinformatics · Apr 4, 2018Peer-reviewedBioinformatics