Author

Michael Mayers

Scripps Research InstituteORCID 0000-0002-7792-0150Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 6

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 4 Approach:statistical model· 4 Research Focus:benchmarking· 3 Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andrew I. SuiD· 5 shared Benjamin M. GoodiD· 3 shared Núria Queralt-RosiñachiD· 3 shared Tong Shu Li· 3 shared Ginger TsuengiD· 2 shared Gregory S. StuppiD· 2 shared Roger TuiD· 2 shared Adriana Carolina Gonzalez-CavazosiD· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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5 shared papersBioinformatics

Andrew I. SuORCID

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Author profile →

6 papers

Recent·Most cited

DrugMechDB: A Curated Database of Drug Mechanisms

Adriana Carolina Gonzalez-Cavazos, Anna Tańska, Michael Mayers, Denise Carvalho‐Silva, Sridharan Brindha, Patrick A. Rewers, Umasri Sankarlal, Lakshmanan Jagannathan, Andrew I. Su

The paper introduces DrugMechDB, a manually curated database of drug mechanisms for training and evaluating computational drug repurposing models.

Scientific Data · Sep 16, 2023Peer-reviewedBioinformatics

Design and application of a knowledge network for automatic prioritization of drug mechanisms

Michael Mayers, Roger Tu, Dylan Steinecke, Tong Shu Li, Núria Queralt-Rosiñach, Andrew I. Su

The paper develops a knowledge network to prioritize drug mechanisms for repositioning, finding it can predict mechanisms with high accuracy.

Bioinformatics · Apr 6, 2022Peer-reviewedBioinformatics

Wikidata as a FAIR knowledge graph for the life sciences

Andra Waagmeester, Gregory S. Stupp, Sebastian Burgstaller-Muehlbacher, Benjamin M. Good, Malachi Griffith, Obi L. Griffith, Kristina Hanspers, Henning Hermjakob, Toby Hudson, Kevin Hybiske, Sarah Keating, Magnus Manske, Michael Mayers, Daniel Mietchen, Elvira Mitraka, , Andrew I. Su

The paper describes Wikidata as a FAIR knowledge graph for life sciences, showcasing its breadth, tools for integration, and use cases in biomedical analysis.

eLife · Mar 16, 2020Peer-reviewedBioinformatics

Structured Reviews for Data and Knowledge Driven Research

Núria Queralt-Rosiñach, Gregory S. Stupp, Tong Shu Li, Michael Mayers, Maureen E. Hoatlin, Matthew Might, Benjamin M. Good, Andrew I. Su

The paper presents a structured review of NGLY1 Deficiency as a knowledge graph, improving hypothesis generation through FAIR principles and enabling collaborative curation.

Database · Jan 1, 2020Peer-reviewedBioinformatics

Applying Citizen Science to Gene, Drug, Disease Relationship Extraction from Biomedical Abstracts.

Ginger Tsueng, Max Nanis, Jennifer Fouquier, Michael Mayers, Benjamin M. Good, Andrew I. Su

The paper demonstrates that citizen scientists can perform relationship extraction from biomedical abstracts using Mark2Cure, highlighting the importance of accurate named entity recognition.

Bioinformatics · Aug 30, 2019Peer-reviewedBioinformatics

Time-resolved compound repositioning predictions on a text-mined knowledge network

Michael Mayers, Tong Shu Li, Núria Queralt-Rosinach, Andrew I Su

The paper evaluates a compound repositioning algorithm using time-resolved biomedical knowledge networks, finding that performance peaks when using older data and declines with newer data.

bioRxiv · May 8, 2019 · PreprintBioinformatics