Author

Avigail Taylor

University of OxfordORCID 0000-0002-8199-1007Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Alessandro BarberisiD· 1 shared Alistair EastoniD· 1 shared Anand Kumar MauryaiD· 1 shared Ashwin JainarayananiD· 1 shared Ashwin M. NandakumariD· 1 shared Cameron R. Lang· 1 shared Clare L. VerrilliD· 1 shared Connia Ren· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperCancer Biology

Alessandro BarberisORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

IGFs regulate cancer cell immune evasion in prostate cancer

Ashwin M. Nandakumar, Alessandro Barberis, Jin-Seon Kim, Cameron R. Lang, Jack V. Mills, Guillaume Rieunier, Dimitrios Doultsinos, Avigail Taylor, Ashwin Jainarayanan, Su Myat Phyu, Leticia Campo, Alistair Easton, Eileen E. Parkes, Timothy James, Freddie Charles Hamdy, , Valentine M. Macaulay

This study shows IGF-1 suppresses immune-related pathways in prostate cancer cells, reducing antigen presentation and increasing PD-L1, which may explain poor immunotherapy response.

Scientific Reports · Nov 3, 2025Peer-reviewedCancer Biology

BiomarkerML: A cloud-based proteomics ML workflow for biomarker discovery

Yuhan Zhou, Anand Kumar Maurya, Yun Deng, Micah Fletcher, Connia Ren, Avigail Taylor

BiomarkerML automates ML/DL analysis of proteomic data for biomarker discovery, using SHAP to identify candidate biomarkers and avoiding over-fitting through cross-validation.

bioRxiv · Oct 16, 2025 · PreprintBioinformatics