Author

Bahar Rahsepar

Boston UniversityORCID 0000-0002-8517-0177Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:deep learning· 1 Assay:DNA methylation· 1 Assay:electronic health records· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Fernando R. FernandeziD· 2 shared John A. WhiteiD· 2 shared Steve RamireziD· 2 shared Aashna Pandya· 1 shared Amaro N Taylor-WeineriD· 1 shared Archit KhoslaiD· 1 shared Benjamin LahneriD· 1 shared Bingbing YuaniD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersNeuroscience

Fernando R. FernandezORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Spatial mapping of immunosuppressive cancer-associated fibroblast gene signatures in H&E-stained images using additive multiple instance learning

Miles Markey, Juhyun Kim, Zvi Goldstein, Ylaine Gerardin, Jacqueline A. Brosnan‐Cashman, Syed Ashar Javed, Dinkar Juyal, Harshith Pagidela, Limin Yu, Bahar Rahsepar, John Abel, Stephanie R. Hennek, Archit Khosla, Amaro N Taylor-Weiner, Chintan Parmar

This paper introduces aMIL, a machine learning method that predicts CAF gene signatures from H&E images, revealing spatial patterns linked to immunosuppression in tumors.

Modern Pathology · Apr 11, 2025Peer-reviewedCancer Biology

Theta phase specific modulation of hippocampal memory neurons

Bahar Rahsepar, Jad Noueihed, Jacob F. Norman, Benjamin Lahner, Melanie H Quick, Kevin Ghaemi, Aashna Pandya, Fernando R. Fernandez, Steve Ramirez, John A. White

This study shows that stimulating engram neurons during the trough of theta oscillations enhances memory recall more than fixed frequency or peak stimulation.

eLife · Jul 4, 2023Peer-reviewedNeuroscience

Hippocampal cells multiplex positive and negative engrams

Monika Shpokayte, Olivia P. McKissick, Xiaonan Guan, Bingbing Yuan, Bahar Rahsepar, Fernando R. Fernandez, Evan A. Ruesch, Stephanie L. Grella, John A. White, X. Shawn Liu, Steve Ramirez

The paper identifies distinct cell populations in the ventral hippocampus that encode appetitive and aversive memories, showing molecular, cellular, and projection-specific differences.

bioRxiv · Dec 11, 2020 · PreprintNeuroscience