Author

Joel A. Rosiene

New York Genome CenterORCID 0000-0002-8610-370XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 4 Research Focus:variant calling· 4 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Marcin B. ImielinskiiD· 4 shared Huasong TianiD· 3 shared Julie M. BehriD· 3 shared Titia de LangeiD· 3 shared Xiaotong YaoiD· 3 shared Aditya S. DeshpandeiD· 2 shared Kevin HadiiD· 2 shared Alain BorczukiD· 1 shared

Activity by Year

2019-2021 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

4 shared papersGenomics

Marcin B. ImielinskiORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

GenomicsbioRxivPreprintMay 26, 2021

Loose ends in cancer genome structure

Julie M. Behr, Xiaotong Yao, Kevin Hadi…·Marcin B. Imielinski

The paper identifies 'loose ends' in cancer genomes, structural variations missed by short-read WGS, and estimates they account for <3% of large-scale structural variation.

2 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedApr 7, 2021

Structural variant evolution after telomere crisis

Sally M. Dewhurst, Xiaotong Yao, Joel A. Rosiene…·Marcin B. Imielinski

The paper investigates structural variants (SVs) generated during telomere crisis, showing that BFB cycles and chromothripsis can occur in clones that escape telomere crisis.

38 citations

humanwhole-genome sequencing

𝕏 PostBluesky

Molecular BiologyNature CommunicationsPeer-reviewedMar 12, 2021

Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions

Daniel Butler, Christopher Mozsary, Cem Meydan…·Christopher E. Mason

This study uses rapid diagnostics and metatranscriptomics to analyze SARS-CoV-2 infection, revealing viral evolution, host responses, and drug interactions in NYC samples.

201 citationstop 1%

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 12, 2019

Novel patterns of complex structural variation revealed across thousands of cancer genome graphs

Kevin Hadi, Xiaotong Yao, Julie M. Behr…·Marcin B. Imielinski

The paper identifies three novel complex structural variation patterns in cancer genomes using genome graph analysis across 2,833 tumor WGS.

14 citations

humanwhole-genome sequencing

𝕏 PostBluesky