Author

Gyan Prakash Mishra

Institute of Life SciencesORCID 0000-0002-8975-0371Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:database / resource· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:virus· 1

Frequent Co-Authors

Arup GhoshiD· 3 shared Atimukta Jha· 2 shared Sunil K. RaghaviD· 2 shared Abhinav K. JainiD· 1 shared Akash M. GuptaiD· 1 shared Amol M. KanampalliwariD· 1 shared Ankit Kumar PathakiD· 1 shared Arijit PandaiD· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBioinformatics

Arup GhoshORCID

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Author profile →

3 papers

Recent·Most cited

Spatio-temporal dynamics of intra-host variability in SARS-CoV-2 genomes

Ankit Kumar Pathak, Gyan Prakash Mishra, Bharathram Uppili, Safal Walia, Saman Fatihi, Tahseen Abbas, Sofia Banu, Arup Ghosh, Amol M. Kanampalliwar, Atimukta Jha, Sana Fatma, Shifu Aggarwal, Mahesh Shanker Dhar, Robin Marwal, Venkatraman Srinivasan Radhakrishnan, , Mitali Mukerji

The paper analyzes intra-host Single Nucleotide Variations (iSNVs) in SARS-CoV-2 genomes across multiple time points and regions, finding that many iSNVs later become population-level variants and some may contribute to immune escape.

Nucleic Acids Research · Jan 13, 2022Peer-reviewedGenomics

Bedsect: An integrated web server application to perform intersection, visualization and functional annotation of genomic regions from multiple datasets

Gyan Prakash Mishra, Arup Ghosh, Atimukta Jha, Sunil K. Raghav

Frontiers in Genetics · Feb 5, 2020Peer-reviewedBioinformatics

EuMicrobedbLite: A lightweight genomic resource and analytic platform for draft oomycete genomes

Arijit Panda, Diya Sen, Arup Ghosh, Akash M. Gupta, Mathu Malar C, Gyan Prakash Mishra, Deeksha Singh, Wenwu Ye, Brett M. Tyler, Sucheta Tripathy

EuMicrobedbLite provides a lightweight genomic resource and analysis platform for oomycete genomes with updated annotations and tools.

Molecular Plant Pathology · Jan 3, 2017Peer-reviewedBioinformatics