Author

Selene L. Fernández-Valverde

Centro de Investigación y de Estudios Avanzados del Instituto Politécnico NacionalORCID 0000-0002-9020-1716Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 4 Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 6 Research Focus:gene regulatory network inference· 4 Assay:bulk RNA-seq· 3 Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

José Antonio Corona-GómeziD· 3 shared Evelia Lorena Coss-NavarreteiD· 2 shared Irving Jair García-López· 2 shared Peter Florian StadleriD· 2 shared Aaron P. RagsdaleiD· 1 shared Adrián CortésiD· 1 shared Adrian V. S. HilliD· 1 shared Alejandra Medina-RiveraiD· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersGenomics

José Antonio Corona-GómezORCID

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6 papers

Recent·Most cited

ImmunologyFrontiers in ImmunologyPeer-reviewedJun 2, 2026

Gene expression profiling of dendritic cell tolerance dysfunction in women with Systemic lupus erythematosus

Ana Laura Hernández-Ledesma, Evelia Lorena Coss-Navarrete, Sofia Salazar-Magaña…·Alejandra Medina-Rivera

The paper identifies transcriptional disruptions in dendritic cells from SLE patients, highlighting interferon-driven changes, impaired IL-10 signaling, and altered lipid metabolism as key factors in tolerance dysfunction.

DOI 10.3389/fimmu.2026.1771959

humanbulk RNA-seq

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GenomicsNaturePeer-reviewedOct 11, 2023

Nationwide genomic biobank in Mexico unravels demographic history and complex trait architecture from 6,057 individuals

Mashaal Sohail, María J. Palma-Martínez, Amanda Yoon-Yee Chong…·Andrés Moreno‐Estrada

134 citationstop 1%

humanwhole-genome sequencing

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BioinformaticsbioRxivPreprintAug 13, 2023

Evolutionary conservation of secondary structures in the lncRNAs of plants

José Antonio Corona-Gómez, Peter Florian Stadler, Selene L. Fernández-Valverde

The paper identifies conserved structural motifs in lncRNAs across 16 Brassicaceae species, highlighting their potential functional significance.

5 citations

ArabidopsisDNA methylation

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GenomicsScientific ReportsPeer-reviewedAug 18, 2022

Transcriptome-guided annotation and functional classification of long non-coding RNAs in Arabidopsis thaliana

José Antonio Corona-Gómez, Evelia Lorena Coss-Navarrete, Irving Jair García-López…·Selene L. Fernández-Valverde

The paper improves the annotation of lncRNAs in Arabidopsis thaliana by integrating 224 transcriptomes and identifies 3772 novel lncRNA genes with functional associations.

27 citations

Arabidopsisbulk RNA-seq

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GenomicsRNAPeer-reviewedApr 2, 2020

Splicing conservation signals in plant long non-coding RNAs

José Antonio Corona-Gómez, Irving Jair García-López, Peter Florian Stadler, Selene L. Fernández-Valverde

The paper identifies splicing conservation in lncRNAs across Brassicaceae species, finding 17.9% of intergenic lncRNAs show conservation, supporting stabilizing selection.

28 citations

plant (other)long-read sequencing

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GenomicsBMC Evolutionary BiologyPeer-reviewedOct 31, 2018

Diverse RNA interference strategies in early-branching metazoans

Andrew Calcino, Selene L. Fernández-Valverde, Ryan J. Taft, Bernard M. Degnan

The paper identifies diverse RNAi components in non-bilaterian animals, revealing unique miRNA, piRNA, and endo-siRNA repertoires compared to bilaterians.

22 citations

bulk RNA-seqstatistical model

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