Author

Fugui Zhu

University of California San DiegoORCID 0000-0002-9164-659XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Genomics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:clustering· 2 Organism:mouse· 2 Assay:scRNA-seq· 2 Research Focus:trajectory inference· 2

Frequent Co-Authors

Qingquan ZhangiD· 4 shared C. NeiliD· 3 shared Elie N. FarahiD· 2 shared Fenyong YaoiD· 2 shared Alexander MonelliD· 1 shared Allen WangiD· 1 shared Andrew D. McCullochiD· 1 shared Angie Hou· 1 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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4 shared papersDevelopmental Biology

Qingquan ZhangORCID

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4 papers

Recent·Most cited

Developmental BiologyNaturePeer-reviewedApr 1, 2026

Genomic mosaicism reveals developmental organization of trunk neural crest-derived ganglia

Keng Ioi Vong, Yanina D. Álvarez, Qingquan Zhang…·Joseph G. Gleeson

The paper uses genomic mosaicism to study clonal dynamics of trunk neural crest-derived ganglia, finding conserved developmental patterns across species.

5 citationstop 2%

humanmouse

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 2, 2025

MERFISH+, a large-scale, multi-omics spatial technology resolves the molecular holograms of the 3D human developing heart

Colin Kern, Qingquan Zhang, Yifan Lu…·Bogdan Bintu

MERFISH+ enables high-resolution spatial multi-omics mapping of gene expression and chromatin organization in developing human hearts with subcellular resolution.

9 citations

humanspatial transcriptomics

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Developmental BiologyCirculation ResearchPeer-reviewedJun 24, 2021

Unveiling unexpected complexity and multipotentiality of early heart fields

Qingquan Zhang, Daniel E. Carlin, Fugui Zhu…·C. Neil

The paper reveals unexpected complexity and multipotentiality of early heart fields through lineage and single-cell analyses, identifying new progenitor sources and developmental relationships.

97 citationstop 2%

mousescRNA-seq

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GenomicsScience AdvancesPeer-reviewedMay 14, 2021

Cardiac Cell Type-Specific Gene Regulatory Programs and Disease Risk Association

James D. Hocker, Olivier Poirion, Fugui Zhu…·Sebastian Preißl

The paper defines cardiac cell type-specific cis-regulatory elements and links disease risk variants to these elements in human hearts.

140 citationstop 2%

humanscATAC-seq

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