CoBRA: Containerized Bioinformatics workflow for Reproducible ChIP/ATAC-seq Analysis - from differential peak calling to pathway analysis
Xintao Qiu, Avery S. Feit, Ariel Feiglin, Yingtian Xie, Nikolas Kesten, Len Taing, Joseph Perkins, Shengqing Stan Gu, Yihao Li, Paloma Cejas, Ningxuan Zhou, Rinath M. Jeselsohn, Myles A Brown, X. Shirley Liu, Henry W. Long
CoBRA provides a reproducible pipeline for ChIP/ATAC-seq analysis, including peak calling, clustering, and pathway analysis, with code available at the given URL.
Genomics Proteomics & Bioinformatics · Jul 18, 2021Peer-reviewedBioinformatics