Author

Hasiba Asma

University at Buffalo, State University of New YorkORCID 0000-0002-9304-2685Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Organism:multiple species· 1

Frequent Co-Authors

Marc S. HalfoniD· 2 shared Alistair MilesiD· 1 shared Chris S. ClarksoniD· 1 shared Craig Stephen WildingiD· 1 shared Daniel P. McDermottiD· 1 shared Ellen Tieke· 1 shared Eric R. LucasiD· 1 shared Eva HeinziD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenomics

Marc S. HalfonORCID

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2 papers

Recent·Most cited

Regulatory genome annotation of 33 insect species

Hasiba Asma, Ellen Tieke, Kevin D. Deem, Jabale Rahmat, Tiffany Dong, Xinbo Huang, Yoshinori Tomoyasu, Marc S. Halfon

The paper develops a workflow for annotating regulatory sequences in insect genomes and provides a database with enhancer predictions for 33 species, validated through multiple lines of evidence.

eLife · Oct 11, 2024Peer-reviewedGenomics

Mechanisms of transcriptional regulation in Anopheles gambiae revealed by allele specific expression

Naomi A. Dyer, Eric R. Lucas, Sanjay Curtis Nagi, Daniel P. McDermott, Jon Haël Brenas, Alistair Miles, Chris S. Clarkson, Henry Ddumba Mawejje, Craig Stephen Wilding, Marc S. Halfon, Hasiba Asma, Eva Heinz, Martin J. Donnelly

The paper identifies cis-regulated genes and cis-regulatory modules in Anopheles gambiae associated with insecticide resistance using allele-specific expression and machine learning.

Proceedings of the Royal Society B Biological Sciences · Sep 1, 2024Peer-reviewedGenetics