Author

Ryoji Amamoto

Howard Hughes Medical InstituteORCID 0000-0002-9335-112XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Molecular Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Constance L. CepkoiD· 3 shared Elizabeth A. LaneiD· 1 shared Emanuela ZuccaroiD· 1 shared Emma R. WestiD· 1 shared Grace K Wallick· 1 shared Hsu-Hsin CheniD· 1 shared Jiho ChoiiD· 1 shared M GarciaiD· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersDevelopmental Biology

Constance L. CepkoORCID

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3 papers

Recent·Most cited

Retinoic acid signaling mediates peripheral cone photoreceptor survival in a mouse model of retina degeneration

Ryoji Amamoto, Grace K Wallick, Constance L. Cepko

The paper identifies retinoic acid signaling in peripheral Muller glia as essential for cone photoreceptor survival in a mouse model of retinal degeneration.

eLife · Mar 2, 2022Peer-reviewedDevelopmental Biology

Probe-Seq enables transcriptional profiling of specific cell types from heterogeneous tissue by RNA-based isolation

Ryoji Amamoto, M Garcia, Emma R. West, Jiho Choi, Sylvain W. Lapan, Elizabeth A. Lane, Norbert Perrimon, Constance L. Cepko

Probe-Seq isolates and profiles specific cell types from heterogeneous tissues using RNA-based fluorescence sorting, applicable across multiple organisms.

eLife · Dec 9, 2019Peer-reviewedMolecular Biology

FIN-Seq: Transcriptional profiling of specific cell types in frozen archived tissue from the human central nervous system

Ryoji Amamoto, Emanuela Zuccaro, Nathan C Curry, Sonia Khurana, Hsu-Hsin Chen, Constance L. Cepko, Paola Arlotta

FIN-Seq enables transcriptional profiling of specific cell types in frozen human CNS tissues using immunolabeled nuclei sequencing.

Nucleic Acids Research · Nov 12, 2019Peer-reviewedNeuroscience