Author

Giana Cirolia

Chan Zuckerberg Biohub San FranciscoORCID 0000-0002-9407-8495Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Giana Cirolia1 paper

Biology Disciplines

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Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1 Organism:mouse· 1 Assay:proteomics· 1

Frequent Co-Authors

Andrew P. MayiD· 1 shared Anil J. AswaniiD· 1 shared Ashley R. WolfiD· 1 shared Christopher M. AdamsiD· 1 shared Dennis R. ThomasiD· 1 shared Jeshua T. Gustafson· 1 shared Kathleen H. Holt· 1 shared Lucy H. MaynardiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMolecular Biology

Andrew P. MayORCID

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2 papers

Recent·Most cited

Performance of IBD machine learning classifiers varies across microbiome training data independent of geographic diversity

Giana Cirolia, Jeshua T. Gustafson, Anil J. Aswani, Ashley R. Wolf

This study evaluates how IBD machine learning classifiers perform across diverse microbiome datasets and finds that model performance varies significantly by evaluation study, not geographic diversity.

bioRxiv · Aug 12, 2026 · PreprintMicrobiology

Methods Matter -- Standard Production Platforms For Recombinant AAV Produce Chemically And Functionally Distinct Vectors

Neil G. Rumachik, Stacy Alyse Malaker, Nicole Poweleit, Lucy H. Maynard, Christopher M. Adams, Ryan D. Leib, Giana Cirolia, Dennis R. Thomas, Susan J. Stamnes, Kathleen H. Holt, Patrick L. Sinn, Andrew P. May, Nicole K. Paulk

This study compares rAAV production methods using different host cells, finding chemically and functionally distinct vectors with differences in PTMs, methylation, and potency.

Molecular Therapy — Methods & Clinical Development · May 21, 2020Peer-reviewedMolecular Biology