Author

Ravi U. Sheth

Columbia UniversityORCID 0000-0002-9556-3441Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Organism:human· 1 Assay:metagenomics· 1 Research Focus:spatial domain detection· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Harris H. WangiD· 2 shared Yiming HuangiD· 2 shared Andrew Kaufman· 1 shared Deirdre RicaurteiD· 1 shared Florencia Velez‐CortesiD· 1 shared Guillaume UrtechoiD· 1 shared Jeongchan Lee· 1 shared Liyuan LiniD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersSystems Biology

Harris H. WangORCID

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2 papers

Recent·Most cited

SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome

Miles Richardson, Shijie Zhao, Liyuan Lin, Ravi U. Sheth, Yiming Qu, Jeongchan Lee, Thomas U. Moody, Deirdre Ricaurte, Yiming Huang, Florencia Velez‐Cortes, Guillaume Urtecho, Harris H. Wang

SAMPL-seq identifies spatial hubs in the human gut microbiome by sampling micron-scale sub-communities and analyzing microbial co-occurrence across individuals and time.

Nature Microbiology · Feb 3, 2025Peer-reviewedSystems Biology

Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics

Yiming Huang, Ravi U. Sheth, Andrew Kaufman, Harris H. Wang

The paper describes a ribonuclease-based method for rRNA depletion in bacterial RNA-seq, validated on gut microbiota isolates and providing probe sets and an online tool for custom probe libraries.

Nucleic Acids Research · Dec 4, 2019Peer-reviewedGenomics