Author

Andrew Kaufman

Columbia University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Assay:CRISPR screen· 1 Organism:mouse· 1 Assay:proteomics· 1

Frequent Co-Authors

Harris H. WangiD· 2 shared Drew R. JonesiD· 1 shared Henri Berger· 1 shared James A. MartiniD· 1 shared Jef D. BoekeiD· 1 shared Julie TrolleiD· 1 shared Liyuan LiuiD· 1 shared Michael E. PacoldiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersSynthetic Biology

Harris H. WangORCID

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2 papers

Recent·Most cited

Resurrecting essential amino acid biosynthesis in a mammalian cell

Julie Trolle, Ross M. McBee, Andrew Kaufman, Sudarshan Pinglay, Henri Berger, Sergei V. German, Liyuan Liu, Michael J. Shen, Xinyi Guo, James A. Martin, Michael E. Pacold, Drew R. Jones, Jef D. Boeke, Harris H. Wang

This paper demonstrates the successful restoration of valine biosynthesis in mammalian cells by integrating synthetic pathways from E. coli, showing that ancient metabolic pathways can be reactivated in metazoans.

eLife · Sep 27, 2022Peer-reviewedSynthetic Biology

Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics

Yiming Huang, Ravi U. Sheth, Andrew Kaufman, Harris H. Wang

The paper describes a ribonuclease-based method for rRNA depletion in bacterial RNA-seq, validated on gut microbiota isolates and providing probe sets and an online tool for custom probe libraries.

Nucleic Acids Research · Dec 4, 2019Peer-reviewedGenomics