Apollo 3: Multi-Species Genome Curation
Garrett Stevens, Kyösti Sutinen, Dario Beraldi…·Ian H Holmes
Apollo 3 is a new manual genome annotation tool that integrates with JBrowse 2, enabling multi-genome editing and synteny visualization.
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University of California, BerkeleyORCID 0000-0002-9605-5895Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
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Garrett Stevens, Kyösti Sutinen, Dario Beraldi…·Ian H Holmes
Apollo 3 is a new manual genome annotation tool that integrates with JBrowse 2, enabling multi-genome editing and synteny visualization.
Colin M. Diesh, Garrett Stevens, Peter Xie…·Ian H Holmes
JBrowse 2 is a genome browser with enhanced views for structural variation and synteny, offering modular design and multiple usage options.
Teresa De Jesus Martinez, Elliot A. Hershberg, Emma Guo…·Ian H Holmes
JBrowse Jupyter provides a Python interface to JBrowse 2 for interactive genomic visualization within Jupyter notebooks.
Eric Yao, Robert Buels, Taner Z. Sen…·Ian H Holmes
JBrowse Connect enables live messaging, notifications, and user-initiated analyses in JBrowse via WebSockets, with JBlast as an example application for BLAST searches integrated with Galaxy.