Diego Robledo

The paper uses single nuclei RNA sequencing to study WSSV infection in shrimp lymphoid organ and identifies potential CRISPR targets for disease resistance.

The paper compares immune responses to viral and bacterial stimuli in three bony fish species using transcriptomic analysis, identifying conserved gene expression patterns and pathways.

This study characterizes the expanded olfactory receptor gene repertoire in Senegalese sole, identifying 455 genes and showing functional expression through transcriptome analysis.

This study evaluates how different reference populations affect SNP imputation and genomic prediction accuracy in Atlantic salmon using low-density SNP panels.

The paper identifies miR-199-5p as a regulator of ifi27l2a expression, linking it to VNN resistance in European seabass through differential expression and functional analysis.

This study compares transgenesis and genome editing across 72 species and 55 genes to assess their effectiveness in enhancing animal production traits, finding gene editing more impactful overall.

This study investigates Amoebic Gill Disease (AGD) in Atlantic salmon using a holo-omic approach, linking host genetics, microbiota, and disease resistance traits.

The paper imputes SNVs and SVs from low-coverage WGS data in Atlantic salmon, showing improved accuracy with SV genotype likelihoods.

The paper generates a full-length transcriptome of the olfactory rosette in Senegalese sole, identifying known and novel transcripts to support reproductive management in aquaculture.

The paper identifies a SNP variant associated with resistance to viral nervous necrosis in European sea bass by integrating genetic and functional genomic data.

This study investigates how ubiquitination of host proteins changes in Atlantic salmon infected with two viruses, finding distinct ubiquitination patterns linked to immune responses.

The paper identifies keratinocyte-driven epithelial hyperplasia as the mechanism of sea lice resistance in coho salmon and highlights divergent immune responses between coho and Atlantic salmon.

This study presents a single-nucleus RNA-sequencing atlas of the postnatal shark retina, identifying 22 cell types and providing insights into retinal evolution.

This study characterizes mesenchymal stromal cells in Atlantic salmon skin using single-nucleus sequencing and spatial transcriptomics, revealing their role in wound healing.

This study evaluates the use of low-density SNP panels with imputation for genomic selection in rainbow trout to improve resistance to Flavobacterium columnare, finding comparable accuracy to high-density panels at lower cost.

The paper compares transcriptomic responses to ISAV infection in resistant and susceptible Atlantic salmon across three tissues at different timepoints, identifying organ-specific immune and non-immune gene expression patterns.

This study examines how sex separation affects gene expression in the rabbit vomeronasal organ, revealing sex- and stage-specific plasticity in response to environmental changes.

This study examines how Piscirickettsia salmonis infection affects DNA methylation in Atlantic salmon, identifying differentially methylated sites and their association with immune-related processes.

This study identifies a major QTL for shell colour variation in common cockles using GWAS and a high-density genetic map, linking it to candidate genes involved in shell architecture and local adaptation.

The paper presents a chromosome-level genome assembly for Senegalese sole, identifies the follicle stimulating hormone receptor (fshr) as the master sex determining gene, and shows its differential expression and allelic variation between sexes.

This study evaluates how genetic relationship between training and validation populations affects genomic prediction accuracy in Atlantic salmon for body weight and sea lice resistance.

The paper uses single-cell RNA sequencing to analyze host response to ISAV in Atlantic salmon cells, revealing transcriptional changes and potential host-virus interactions.

This paper provides the first comprehensive RNA-seq analysis of the rabbit vomeronasal organ transcriptome, revealing age- and function-dependent gene expression patterns.

This study identifies genetic and functional basis of resistance to ISAV in Atlantic salmon using GWAS and RNA sequencing, finding TRIM25 as a key antiviral gene.

The paper investigates genetic resistance to Salmon Rickettsial Syndrome in Atlantic salmon using RNA sequencing, identifying polygenic traits and immune-related pathways associated with resistance.

The paper investigates neurogenesis in adult catshark retinas, finding reduced proliferation and neurogenesis compared to juveniles, supported by histological and RNA-Seq analyses.

This study identifies 15,483 high-confidence structural variants in 492 Atlantic salmon genomes, revealing their role in population structure, functional impact, and domestication traits.

This study identifies genetic loci and gene expression patterns associated with Campylobacter resistance in broiler chickens, providing insights for breeding programs.

This study evaluates the performance of low and medium density SNP panels for genomic prediction in aquaculture species, showing that accuracies remain high even at 1,000 SNPs.