Author

Isaac E. Kim

Brown UniversityORCID 0000-0002-9737-8100Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Approach:Bayesian inference· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Jeffrey A. BaileyiD· 3 shared Ann Marie MoormanniD· 2 shared Cliff I. OduoriD· 2 shared David GiesbrechtiD· 2 shared Rebecca CrudaleiD· 2 shared Sin Ting HuiiD· 2 shared Aaron C. ErmeliD· 1 shared Abebe Alemu FolaiD· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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3 shared papersGenomics

Jeffrey A. BaileyORCID

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3 papers

Recent·Most cited

Genetic & Genomic MedicineScientific ReportsPeer-reviewedOct 7, 2025

Scalable long-read Nanopore HPV16 Amplicon-based Whole-Genome Sequencing

Titus Kipkemboi Maina, David Giesbrecht, Cliff I. Oduor…·Jeffrey A. Bailey

This paper develops a scalable long-read sequencing method for HPV16 genome analysis, showing high accuracy and capturing full genetic diversity across multiple lineages.

DOI 10.1038/s41598-025-18664-w

humanlong-read sequencing

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GenomicseLifePeer-reviewedOct 7, 2024

Interchromosomal segmental duplication drives translocation and loss of P. falciparum histidine-rich protein 3

Nicholas J. Hathaway, Isaac E. Kim, Neeva WernsmanYoung…·Jeffrey A. Bailey

The paper analyzes whole-genome-sequenced Plasmodium falciparum samples to understand gene deletions associated with malaria rapid diagnostic tests, identifying patterns of chromosomal rearrangements and duplication.

3 citations

plant (other)whole-genome sequencing

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GenomicsbioRxivPreprintMay 3, 2024

Incorporation of Epstein-Barr viral variation implicates significance of LMP1 in survival prediction and prognostic subgrouping in Burkitt lymphoma

Isaac E. Kim, Cliff I. Oduor, Julian Stamp…·Jeffrey A. Bailey

The paper identifies EBV variants, particularly in LMP1, associated with survival in Burkitt lymphoma and defines prognostic subgroups based on these features.

DOI 10.1101/2024.05.03.592343

humanwhole-genome sequencing

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