Author

Jack C. D. Lee

Great Ormond Street Hospital for Children NHS Foundation TrustORCID 0000-0002-9866-2808Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:differential expression· 1 Research Focus:genome assembly· 1 Organism:human· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

Frequent Co-Authors

Alasdair BamfordiD· 1 shared Alexander LennoniD· 1 shared Amani Alrashidi· 1 shared Andrew D. MillardiD· 1 shared Andrew KinsellaiD· 1 shared Angelika Kopec· 1 shared Arezoo Pedramfar· 1 shared Ashirwad MerveiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenetic & Genomic Medicine

Alasdair BamfordORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Rolling out plaque-2-sequence: a single plaque sequencing approach enabling rapid, low-cost sequencing of phages directly from plaques

Slawomir Michniewski, Rebecca Glenny, Andrew Kinsella, Kane Porter, Kayne Wright, Sophie Harrison, Nzubechukwu I Ugokwe, Amani Alrashidi, Srwa.J. Rashid, Chisomaga Eke, Jack C. D. Lee, Faizal Patel, Theo Josephs, Arezoo Pedramfar, Max Coleman, , Andrew D. Millard

This paper introduces plaque-2-sequence, a low-cost, high-throughput method for sequencing phage genomes directly from plaques, enabling rapid and scalable genomic analysis of phages.

bioRxiv · Nov 1, 2025 · PreprintMicrobiology

Translating metagenomics into clinical practice of complex paediatric neurological presentations

Justin Penner, Jane K. Hassell, Julianne Rose Brown, Kshitij Mankad, Nathaniel Storey, Laura Atkinson, Nisha Ranganathan, Alexander Lennon, Jack C. D. Lee, Dimitrios Champsas, Angelika Kopec, Divya Shah, Cristina Venturini, Garth L. J. Dixon, Surjo Kiran De, , Sofia Morfopoulou

This study demonstrates that clinical metagenomics improves diagnostic outcomes for undiagnosed complex paediatric neurological cases, particularly in immunocompromised patients.

Journal of Infection · Aug 7, 2023Peer-reviewedGenetic & Genomic Medicine