Lukas Jelonek

sORFdb is a database for small proteins and sORFs in bacteria, addressing gaps in detection and functional annotation through curated data and family classification.

BakRep provides a searchable web repository of 661,405 bacterial genomes with consistent characterizations and metadata, enabling flexible querying and offline analysis.

Bakta annotates bacterial genomes with one taxon-independent database, uses MD5-hash protein lookups to skip alignments and assign cross-references, detects small proteins, and lowers hypothetical-protein rates versus Prokka/DFAST.