Jochen Blom

The paper uses R-DeeP to show stress-induced compartment-specific RNA buffering of protein aggregation in yeast, with nuclear RNA retention protecting nuclear proteins from aggregation.

The paper identifies uORFs in bacterial mRNAs using bioinformatics and experimental validation, revealing translational coupling and ribosome-mediated RBS occlusion as regulatory mechanisms.

This paper uses interpretable machine learning to predict drought stress in soil metagenomes with high accuracy by identifying marker taxa.

Bakta annotates bacterial genomes with one taxon-independent database, uses MD5-hash protein lookups to skip alignments and assign cross-references, detects small proteins, and lowers hypothetical-protein rates versus Prokka/DFAST.