David Příhoda

Ovo provides an open-source platform for de novo protein design, integrating tools, workflows, and visualization to simplify and scale the design process.

mRNAid is an open-source software that optimizes mRNA sequences to reduce immunogenicity, improve stability, and enhance protein output.

TraceTrack is an open-source tool for batch processing, aligning, and visualizing Sanger sequencing chromatograms, offering improved functionality over existing software.

BioPhi provides automated tools for antibody humanization and humanness evaluation using deep learning and natural antibody repertoires, achieving results comparable to human experts.

Mutation Maker is an open-source tool for designing mutagenic oligos in protein engineering, enabling efficient and accurate library creation for both random and directed mutagenesis.

This paper introduces DeepBGC, a deep learning method for improved biosynthetic gene cluster prediction, uncovering previously undetectable clusters with potential novel biological activities.