Author

ELAINE I. TUOMANEN

St. Jude Children's Research HospitalORCID 0000-0003-0349-8716Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Paul Glyndwr ThomasiD· 2 shared Aditya H. GauriD· 1 shared Allison M. KirkiD· 1 shared Allister J. LoughraniD· 1 shared Amanda ColeiD· 1 shared Anastasia A. MinervinaiD· 1 shared Ashleigh GoweniD· 1 shared Ashley H. CastellawiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersImmunology

Paul Glyndwr ThomasORCID

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2 papers

Recent·Most cited

ImmunologyNature MethodsPeer-reviewedNov 24, 2025

TIRTL-seq: Deep, quantitative, and affordable paired TCR repertoire sequencing

Mikhail V. Pogorelyy, Allison M. Kirk, Samir Adhikari…·Paul Glyndwr Thomas

TIRTL-seq provides a scalable, cost-effective method for paired TCR repertoire sequencing, enabling accurate identification of TCR chain pairings and clonotype dynamics in large cohorts.

43 citationstop 1%

humanscRNA-seq

𝕏 PostBluesky

NeurosciencebioRxivPreprintOct 19, 2021

Fetal neural progenitors process TLR signals from bacterial components to enhance proliferation and rework brain development

Beth Mann, Jeremy Chase Crawford, Kavya Reddy…·ELAINE I. TUOMANEN

The paper shows bacterial PAMPs activate TLR2/6 on fetal NPCs, enhancing proliferation and altering brain development in mice.

DOI 10.1101/2021.10.19.464985

mousebulk RNA-seq

𝕏 PostBluesky