Author

Thomas Benfield

Amager HospitalORCID 0000-0003-0698-9385Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Organism:bacteria (other)· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Andreas Dehlbæk KnudseniD· 2 shared Flora MikaeloffiD· 2 shared Julie HøghiD· 2 shared Marco GelpiiD· 2 shared Ujjwal NeogiiD· 2 shared Adil MardinoğluiD· 1 shared Aeilko Having ZwindermaniD· 1 shared Ákos VégváriiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersSystems Biology

Andreas Dehlbæk KnudsenORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Systems BiologybioRxivPreprintJan 15, 2025

Altered Glycolysis TCA Anaplerosis Axis Impairs Monocyte Migration and Trains Macrophage Polarization in Long-term Treated HIV Infection

Alejandra Escós, Anoop T. Ambikan, Sabrina Schulster…·Ujjwal Neogi

The paper identifies metabolic reprogramming in HIV-treated individuals that impairs monocyte migration and promotes M2-like macrophage polarization, enhancing HIV susceptibility.

DOI 10.1101/2025.01.15.633214

humanscRNA-seq

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BioinformaticseLifePeer-reviewedFeb 16, 2023

Network-based multi-omics integration reveals metabolic at-risk profile within treated HIV-infection

Flora Mikaeloff, Marco Gelpi, Rui Benfeitas…·Ujjwal Neogi

The paper identifies three metabolic at-risk profiles in HIV-treated patients using multi-omics integration, highlighting dysregulated metabolism and microbiome interactions.

25 citationstop 2%

humanmetabolomics

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GenomicsNature CommunicationsPeer-reviewedMay 15, 2019

Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis

John A. Lees, Bart Ferwerda, Philip H. C. Kremer…·Diederik van de Beek

The paper uses genome-wide association studies to show human and pneumococcal genetic variation influences susceptibility and severity of pneumococcal meningitis.

112 citationstop 1%

humanbacteria (other)

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