Author

Eugen Ursu

Institute of BiochemistryORCID 0000-0003-0788-7831Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Robi TăcutuiD· 3 shared Anaïs EqueyiD· 1 shared Angela Oliveira PiscoiD· 1 shared Aygul R. MinnegalievaiD· 1 shared Cyril LaggeriD· 1 shared Dmitri ToreniD· 1 shared Gabriela BunuiD· 1 shared Geir Kjetil SandveiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersBioinformatics

Robi TăcutuORCID

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3 papers

Recent·Most cited

BioinformaticsNature Machine IntelligencePeer-reviewedAug 20, 2025

Training data composition determines machine learning generalization and biological rule discovery

Eugen Ursu, Aygul R. Minnegalieva, Puneet Rawat…·Victor Greiff

This study shows that the composition of training data, especially negative examples, affects machine learning model performance and biological rule discovery in antibody-antigen binding.

37 citationstop 1%

protein structuremachine learning (classical)

𝕏 PostBluesky

BioinformaticsbioRxivPreprintNov 1, 2022

Drug prediction for reversing AD/PD transcriptional profiles using an aging of systems-centric approach

Gabriela Bunu, Dmitri Toren, Eugen Ursu…·Robi Tăcutu

This study investigates the similarity between transcriptional changes in healthy aging and age-related diseases to predict drugs that could reverse these common patterns.

DOI 10.1101/2022.11.01.514657

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintAug 13, 2021

scAgeCom: a murine atlas of age-related changes in intercellular communication inferred with the package scDiffCom

Cyril Lagger, Eugen Ursu, Anaïs Equey…·João Pedro de Magalhães

The paper introduces scAgeCom, an atlas of age-related intercellular communication changes in 23 mouse tissues, using the scDiffCom package to analyze single-cell RNA-seq data from two consortia.

16 citations

mousescRNA-seq

𝕏 PostBluesky