Author

Humberto J. Ferreira

Centre Hospitalier Universitaire VaudoisORCID 0000-0003-0834-2956Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Alex K. ShalekiD· 1 shared Alizée J GrimmiD· 1 shared Allon WagneriD· 1 shared Andreas FeißtiD· 1 shared Anna C. AschenbrenneriD· 1 shared Anne I. Kraemer· 1 shared Arik HorneiD· 1 shared Aspram MinasyaniD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperSystems Biology

Alex K. ShalekORCID

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2 papers

Recent·Most cited

ImmunologyCancer CellPeer-reviewedJul 31, 2025

Myeloid cell networks determine reinstatement of original immune environments in recurrent ovarian cancer

Eleonora Ghisoni, Fabrizio Benedetti, Aspram Minasyan…·Denarda Dangaj Laniti

The paper identifies immune phenotypes and myeloid cell networks in recurrent ovarian cancer that influence prognosis and immune environment reinstatement.

41 citationstop 1%

humanscRNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintMay 28, 2020

Alterations of multiple alveolar macrophage states in chronic obstructive pulmonary disease

Kevin E. Bassler, Wataru Fujii, Theodore S. Kapellos…·Joachim Ludwig Schultze

This study uses single-cell RNA-seq and computational methods to analyze macrophage states in COPD patients, revealing transcriptional changes and metabolic shifts associated with the disease.

17 citations

humanscRNA-seq

𝕏 PostBluesky