Author

Christophe Arpin

Lyon 1 UniversitéORCID 0000-0003-0915-5554Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Olivier GandrilloniD· 3 shared Daphné LaubretoniD· 1 shared Fabien Crauste AiD· 1 shared Franck PicardiD· 1 shared Gérald RaverotiD· 1 shared Jacqueline MarveliD· 1 shared M. DuboisiD· 1 shared Madge MartiniD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersImmunology

Olivier GandrillonORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

ImmunologybioRxivPreprintFeb 17, 2025

A temporary challenge by tumor cells can lead to a permanent partial-impairment of memory CD8 T cell function

Daphné Laubreton, Margaux Prieux, Sophia Djebali…·Jacqueline Marvel

This study compares memory CD8 T cells generated from tumor rejection and acute viral infection, finding that tumor-induced cells show persistent functional defects similar to exhaustion.

DOI 10.1101/2025.02.17.638652

mousebulk RNA-seq

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Systems BiologybioRxivPreprintMar 1, 2024

In silico modelling of CD8 T cell immune response links genetic regulation to population dynamics

Thi Nhu Thao Nguyen, Madge Martin, Christophe Arpin…·Fabien Crauste A

This study models CD8 T cell immune response using a multiscale agent-based approach to link genetic regulation to population dynamics.

DOI 10.1101/2024.03.01.582928

statistical model

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BioinformaticsIn Silico BiologyPeer-reviewedOct 31, 2023

scAN1.0: A reproducible and standardized pipeline for processing 10X single cell RNAseq data

Maxime Lepetit, Mirela Diana Ilie, Marie Chanal…·Olivier Gandrillon

scAN1.0 is a reproducible pipeline for processing 10X single cell RNAseq data, demonstrating its utility in analyzing human and murine datasets.

2 citations

humanmouse

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