Author

Raquibul Hannan

The University of Texas Southwestern Medical CenterORCID 0000-0003-1282-056XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Laurentiu M. PopiD· 2 shared Tao WangiD· 2 shared Adam RusekiD· 1 shared Alicia MalewskaiD· 1 shared Anthony J. DavisiD· 1 shared Ariella B. HankeriD· 1 shared Brock J. SishciD· 1 shared Carlos L. ArteagaiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCancer Biology

Laurentiu M. PopORCID

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3 papers

Recent·Most cited

Cancer BiologyMolecular Cancer TherapeuticsPeer-reviewedOct 13, 2025

Immune stromal components impede biological effectiveness of carbon ion therapy in a preclinical model of pancreatic ductal adenocarcinoma

Katy L. Swancutt, Eslam A. Elghonaimy, James H. Nicholson…·Todd Anthony Aguilera

This study evaluates carbon ion therapy's effectiveness in pancreatic ductal adenocarcinoma, finding that immune stromal components reduce its efficacy in vivo compared to in vitro results.

4 citations

mousebulk RNA-seq

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BioinformaticsNature MethodsPeer-reviewedSep 3, 2024

Mapping Cell-to-cell Interactions from Spatially Resolved Transcriptomics Data

James J. Zhu, Yunguan Wang, Woo Yong Chang…·Tao Wang

The paper introduces a Bayesian framework to map cell-cell interactions from spatial transcriptomics data, revealing new biological insights in cancer and immune responses.

74 citationstop 1%

humanspatial transcriptomics

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BioinformaticsScience ImmunologyPeer-reviewedFeb 14, 2020

Tumor Neoantigenicity Assessment with CSiN Score Incorporates Clonality and Immunogenicity to Predict Immunotherapy Outcomes

Tianshi Lu, Shidan Wang, Lin Xu…·Tao Wang

The paper introduces the CSiN score to predict immunotherapy outcomes by assessing tumor neoantigen quality through clonality and immunogenicity, showing improved performance over existing methods.

48 citations

humanwhole-exome sequencing

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