Juliana Bernardes

The paper catalogs Y' elements in S. cerevisiae, revealing structural diversity and a potential role in telomere length regulation.

This study shows that transient telomere uncapping in yeast causes genomic rearrangements and telomere elongation, with implications for genome stability and evolution.

This study uses single-cell transcriptomics to analyze reproductive life stages of Acantharia, identifying genetic evidence for a sexual cycle involving gamete-like swarmers.

ClonalTree reconstructs B cell lineage trees using genotype abundances and minimum spanning trees, outperforming existing methods in speed and accuracy for high-throughput BCR sequencing data.

This paper introduces a multi-objective clustering method for identifying clonally-related sequences in B cell repertoire data, showing improved accuracy and efficiency compared to existing tools.

DAVI clusters and visualizes protein domain architectures, offering a user-friendly tool for comparing and analyzing domain structures.

The paper introduces a method to generate high-precision ground truth data for evaluating clonal grouping methods in B-cell populations using real repertoires and V(D)J annotations.

2dSS is a web server that visualizes and compares protein secondary structure predictions through 2D-alignment and prediction comparison tools.