Author

Valerie N. Fraser

Oregon State UniversityORCID 0000-0003-1422-5289Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Maria G. Ivanchenko· 1 shared Mitra AnsariolaiD· 1 shared Molly S. MegrawiD· 1 shared Olivia R. OzguciD· 1 shared Russell A. GouldiD· 1 shared Sergei A. FilichkiniD· 1 shared Shawn T. O’NeiliD· 1 shared Zachary A. BrightiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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8 top collaborators · 28 mutual co-author links

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1 shared paperGenomics

Maria G. Ivanchenko

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1 paper

Recent·Most cited

GenomicsbioRxivPreprintSep 1, 2020

Accurate transcription start sites enable mining for the cis-regulatory determinants of tissue specific gene expression

Mitra Ansariola, Valerie N. Fraser, Sergei A. Filichkin…·Molly S. Megraw

The paper identifies cis-regulatory determinants of tissue-specific gene expression in Arabidopsis thaliana by analyzing TSS-seq, OC-seq, and RNA-seq data, finding that TSS-proximal TF binding sites are more important than distal chromatin regions.

1 citation

Arabidopsisbulk RNA-seq

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