Author

JAMES A. KOLMER

Agricultural Research ServiceORCID 0000-0003-1790-202XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:genome assembly· 2 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Adil SalhiiD· 1 shared Ahmed F. ElkotiD· 1 shared Alexander PutraiD· 1 shared Amir M. H. IbrahimiD· 1 shared Amir SharoniD· 1 shared Amy BernardoiD· 1 shared Ana B. Perera· 1 shared Andrea González-MuñoziD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Adil SalhiORCID

Mutual co-authors in cluster

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4 papers

Recent·Most cited

GenomicsThe Plant GenomePeer-reviewedJan 5, 2025

Identification of leaf rust resistance loci in hard winter wheat using genome-wide association mapping

Indira Priyadarshini Lakkakula, JAMES A. KOLMER, Rajat Sharma…·Meriem Aoun

This study identifies leaf rust resistance loci in hard winter wheat using genome-wide association mapping and finds 20 SNPs likely associated with novel resistance loci.

11 citationstop 4%

whole-genome sequencingstatistical model

𝕏 PostBluesky

Plant BiologyPlant Biotechnology JournalPeer-reviewedSep 18, 2024

Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U-genome for wheat improvement

Jatinder Singh, Santosh Gudi, Peter J. Maughan…·Upinder Gill

This study presents a high-quality genome assembly of Ae. umbellulata and resequencing data revealing structural variations, evolutionary sub-populations, and new resistance gene haplotypes useful for wheat improvement.

16 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

GenomicsNaturePeer-reviewedAug 14, 2024

Origin and evolution of the bread wheat D genome

Emile Cavalet-Giorsa, Andrea González-Muñoz, Naveenkumar Athiyannan…·Simon G. Krattinger

The paper analyzes the genetic composition and history of the bread wheat D genome using a pangenome of its donor species, revealing contributions from discrete subpopulations of Aegilops tauschii.

107 citationstop 1%

statistical modeldatabase / resource

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GenomicsG3 Genes Genomes GeneticsPeer-reviewedJul 8, 2021

Whole-genome sequencing of multiple isolates of Puccinia triticina reveals asexual lineages evolving by recurrent mutations.

John P. Fellers, Sharadha Sakthikumar, Fei He…·JAMES A. KOLMER

The paper analyzes whole-genome sequences of 121 Puccinia triticina isolates to study lineage evolution and mutation patterns in asexual lineages.

23 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky