Author
Utrecht UniversityORCID 0000-0003-1791-7555Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
5 papers
Recent·Most cited
Victor Reys, Marco Giulini, Vlad Cojocaru…·Alexandre M. J. J. Bonvin
The paper summarizes HADDOCK's performance in CAPRI rounds 47-55, highlighting the effectiveness of integrating HADDOCK with AI-driven methods like AlphaFold2 for protein complex structure prediction.
Nicolas Renaud, Cunliang Geng, Sonja Georgievska…·Li C. Xue
DeepRank uses 3D CNNs to mine protein-protein interfaces, achieving competitive or better performance in classification and docking model ranking.
Francesco Ambrosetti, Tobias Hegelund Olsen, Pier Paolo Olimpieri…·Alexandre M. J. J. Bonvin
proABC-2 predicts antibody-antigen contacts using a convolutional neural network and integrates with HADDOCK for docking.
Panagiotis I. Koukos, Jorge Roel‐Touris, Francesco Ambrosetti…·Alexandre M. J. J. Bonvin
The paper evaluates HADDOCK's performance in CAPRI rounds 38-45, showing it produces acceptable or better models for most targets using data-driven strategies.
Mattia Miotto, Pier Paolo Olimpieri, Lorenzo Di Rienzo…·Edoardo Milanetti
The paper introduces a graph-theoretical framework to assess protein thermal stability using structural data, achieving 76% accuracy in distinguishing thermostable from mesostable proteins.