Author

Shuta Asai

RIKEN Center for Sustainable Resource ScienceORCID 0000-0003-1898-1786Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1 Research Focus:host-pathogen & immune response· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Hidetoshi SazeiD· 1 shared Hiroki SaitoiD· 1 shared Jérémy BerthelieriD· 1 shared Ken KomatsuiD· 1 shared Ken ShirasuiD· 1 shared Leonardo FurciiD· 1 shared Masaya YamazakiiD· 1 shared Munissa SadykovaiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenetics

Hidetoshi SazeORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintSep 9, 2026

Comprehensive functional mapping of accessory chromosomes identifies a dominant virulence-regulator paralog in tomato wilt pathogen

Masaya Yamazaki, Hiroki Saito, Shuta Asai…·Tsutomu Arie

The paper identifies a dominant virulence regulator in the tomato wilt pathogen by systematically analyzing accessory chromosomes through CRISPR/Cas9 mutagenesis.

DOI 10.64898/2026.09.08.750270

plant (other)genetic perturbation / CRISPR

𝕏 PostBluesky

GeneticsbioRxivPreprintSep 21, 2022

Long-read direct RNA sequencing reveals epigenetic regulation of chimeric gene-transposon transcripts in Arabidopsis thaliana

Jérémy Berthelier, Leonardo Furci, Shuta Asai…·Hidetoshi Saze

The paper uses long-read RNA sequencing to study TE-gene transcripts in Arabidopsis, finding epigenetic regulation of their production and impact on gene function.

DOI 10.1101/2022.09.21.507229

Arabidopsislong-read sequencing

𝕏 PostBluesky