Enes Senel

This study benchmarks single-cell foundation models for data integration using real-world RNA-seq data and finds that fine-tuned scGPT_CP performs best in technical correction while scVI is the top overall performer.

This study compares the performance of Ultima UG 100 and Illumina NovaSeq X Plus platforms for single-cell RNA sequencing, finding comparable results in cell type identification and gene expression.

Optocoder decodes spatially indexed bead arrays from microscopy images to match barcodes with sequenced data, improving accuracy and efficiency.