Author

Kiyoshi F. Fukutani

Dartmouth CollegeORCID 0000-0003-2223-0918Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Research Focus:benchmarking· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Bruce A. StantoniD· 2 shared Thomas H. HamptoniD· 2 shared Amanda B. Nymon· 1 shared Artur T. L. QueiroziD· 1 shared Bruno B. AndradeiD· 1 shared Carolyn Roche· 1 shared Carson E. FingeriD· 1 shared Eduardo Rocha FukutaniiD· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersPharmacology & Toxicology

Bruce A. StantonORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Pharmacology & ToxicologyAmerican Journal of Physiology-Lung Cellular and Molecular PhysiologyPeer-reviewedOct 22, 2024

Gene expression responses of CF airway epithelial cells exposed to elexacaftor/tezacaftor/ivacaftor (ETI) suggest benefits beyond improved CFTR channel function

Thomas H. Hampton, Roxanna Barnaby, Carolyn Roche…·Bruce A. Stanton

This study shows ETI increases defensin gene expression and reduces MMP10, MMP12, and inflammatory signaling in CF airway epithelial cells.

19 citationstop 3%

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsmSystemsPeer-reviewedOct 18, 2024

E.PathDash, pathway activation analysis of publicly available pathogen gene expression data

Lily D. Taub, Thomas H. Hampton, Sharanya Sarkar…·Bruce A. Stanton

E.PathDash provides a tool for analyzing gene expression data from pathogens, enabling rapid pathway activation analysis and reproducibility assessment across multiple studies.

2 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

GenomicsPLoS ONEPeer-reviewedFeb 25, 2020

Systems biology analysis of publicly available transcriptomic data reveals a critical link between AKR1B10 gene expression, smoking and occurrence of lung cancer

Juan Manuel Cubillos-Angulo, Eduardo Rocha Fukutani, Luís A. B. Cruz…·Kiyoshi F. Fukutani

The paper identifies AKR1B10 as a gene linked to smoking and lung cancer using transcriptomic data from six studies.

22 citations

humanbulk RNA-seq

𝕏 PostBluesky