Author

Jun Duan

Simon Fraser UniversityORCID 0000-0003-2279-9290Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

William HsiaoiD· 2 shared Anoosha SehariD· 1 shared Chelsea G. HimsworthiD· 1 shared Damion DooleyiD· 1 shared Emma GriffithsiD· 1 shared Fiona S. L. BrinkmaniD· 1 shared Gary Van DomselaariD· 1 shared Ivan S. Gill· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

William HsiaoORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsNAR Genomics and BioinformaticsPeer-reviewedOct 7, 2025

VIRUS-MVP: A framework for comprehensive surveillance of viral mutations and their functional impacts

Muhammad Zohaib Anwar, Ivan S. Gill, Madeline Iseminger…·William Hsiao

VIRUS-MVP tracks viral mutations and their functional impacts across multiple viruses, providing tools for analysis and visualization.

2 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintFeb 24, 2022

ProbeTools: Designing hybridization probes for targeted genomic sequencing of diverse and hypervariable viral taxa

Kevin S. Kuchinski, Jun Duan, Chelsea G. Himsworth…·Natalie Prystajecky

ProbeTools designs hybridization probes for viral sequencing, validated with a panel targeting influenza A virus HA and NA segments, showing high coverage and enrichment in silico and in vitro.

1 citation

viruswhole-genome sequencing

𝕏 PostBluesky