Author

Santosh Kumar Anand

University of GenevaORCID 0000-0003-2287-0229Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Bradford W DaigneaultiD· 1 shared Gianluca Della VedovaiD· 1 shared Hadrien Soldati· 1 shared João Diego de Agostini LosanoiD· 1 shared Jorge Avila CartesiD· 1 shared Ludovica VanzaniD· 1 shared MUHAMMAD SAAD SIDDIQUEiD· 1 shared Nicole Jane FrancisiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperCell Biology

Bradford W DaigneaultORCID

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3 papers

Recent·Most cited

Cell BiologybioRxivPreprintMar 24, 2026

Tetrahydrocannabinol exposure to postejaculatory sperm compromises sperm structure, function, the epigenome, and early embryo development

MUHAMMAD SAAD SIDDIQUE, Santosh Kumar Anand, João Diego de Agostini Losano…·Bradford W Daigneault

This study shows that THC exposure to postejaculatory sperm reduces motility, damages DNA, impairs acrosome integrity, alters the methylome, and decreases embryo development potential.

2 citations

proteomicsDNA methylation

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BioinformaticsGigaSciencePeer-reviewedDec 28, 2022

Accurate and Fast Clade Assignment via Deep Learning and Frequency Chaos Game Representation

Jorge Avila Cartes, Santosh Kumar Anand, Simone Ciccolella…·Gianluca Della Vedova

The paper develops CouGaR-g, a deep learning tool using FCGR and CNNs for accurate and fast clade assignment of SARS-CoV-2 sequences, achieving 96.29% accuracy on GISAID data.

20 citations

viruswhole-genome sequencing

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GeneticsNature CommunicationsPeer-reviewedJun 7, 2021

High throughput screening identifies SOX2 as a Super Pioneer Factor that inhibits DNA methylation maintenance at its binding sites

Ludovica Vanzan, Hadrien Soldati, Victor Ythier…·Rabih Murr

The paper identifies SOX2 as a super pioneer factor that inhibits DNA methylation maintenance at its binding sites through passive demethylation during replication.

53 citations

humanDNA methylation

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