Author

Alec Victorsen

University of ChicagoORCID 0000-0003-2326-0916Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Organism:Drosophila· 2 Research Focus:benchmarking· 1 Organism:C. elegans· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Jiahao GaoiD· 2 shared Jinrui XuiD· 2 shared Kevin P. WhiteiD· 2 shared Louis GevirtzmaniD· 2 shared Mark GersteiniD· 2 shared Michelle M. Kudron· 2 shared R WaterstoniD· 2 shared V ReinkeiD· 2 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Jiahao GaoORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintJan 18, 2024

Binding profiles for 954 Drosophila and C. elegans transcription factors revealtissue specific regulatory relationships

Michelle M. Kudron, Louis Gevirtzman, Alec Victorsen…·R Waterston

The paper presents a catalog of transcription factor binding sites in Drosophila and C. elegans, revealing tissue-specific regulatory relationships using machine learning.

4 citations

DrosophilaC. elegans

𝕏 PostBluesky

GenomicsNucleic Acids ResearchPeer-reviewedDec 18, 2020

To mock or not: a comprehensive comparison of mock IP and DNA input for ChIP-seq

Jinrui Xu, Michelle M. Kudron, Alec Victorsen…·Mark Gerstein

This study compares mock IP and DNA input controls in ChIP-seq, showing that mock IP better removes spurious sites, while DNA input has unique advantages, and proposes combining both for improved binding site detection.

19 citations

humanmouse

𝕏 PostBluesky