Author

Chloe Herman

Northern Arizona UniversityORCID 0000-0003-2479-9710Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:metagenomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:host-pathogen & immune response· 1 Assay:metabolomics· 1 Organism:mouse· 1 Research Focus:software / tool· 1

Frequent Co-Authors

J. Gregory CaporasoiD· 2 shared Allegra T. AroniD· 1 shared Anthony SimardiD· 1 shared Christos Konstantinos MatzorosiD· 1 shared Colin V. Wood· 1 shared Colin WoodiD· 1 shared Daisy L. Barroso· 1 shared David Hattan· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersMicrobiology

J. Gregory CaporasoORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintMay 30, 2026

Bacteroides fragilis modulates gut microbiome community composition, frontal cortex gene expression, and fecal and frontal cortex metabolites in a mouse model of Alzheimers disease pathologies

Kathryn A Conn, Olivia Schwartz, Shreya Dikshit…·Emily K. Cope

This study shows that Bacteroides fragilis treatment in AD mice alters gut microbiota, reduces neuroinflammation markers, and normalizes brain metabolites.

DOI 10.64898/2026.05.29.728805

mousebulk RNA-seq

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BioinformaticsbioRxivPreprintJan 27, 2025

MOSHPIT: accessible, reproducible metagenome data science on the QIIME 2 framework

Michał Ziemski, Liz Gehret, Anthony Simard…·Nicholas A. Bokulich

MOSHPIT provides a reproducible metagenome analysis tool built on QIIME 2, integrating validated tools and interfaces for scalable and accessible data science.

9 citations

metagenomicsexperimental assay

𝕏 PostBluesky