Author

Huiming Xia

Washington University in St. LouisORCID 0000-0003-2571-1880Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Organism:human· 2 Research Focus:variant effect prediction· 2 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Joshua F. McMichaeliD· 3 shared Malachi GriffithiD· 3 shared Obi L. GriffithiD· 3 shared Christopher A. MilleriD· 2 shared Gavin P. DunniD· 2 shared Jasreet HundaliD· 2 shared Kelsy C. CottoiD· 2 shared Megan M. RichtersiD· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Joshua F. McMichaelORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsScience ImmunologyPeer-reviewedApr 7, 2023

Computational prediction of MHC anchor locations guide neoantigen identification and prioritization

Huiming Xia, Joshua F. McMichael, Michelle Becker‐Hapak…·Malachi Griffith

The paper predicts MHC anchor positions for 328 HLA alleles and shows that incorporating these improves neoantigen identification by correcting misclassified candidates in tumor samples.

30 citations

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsNature CommunicationsPeer-reviewedMar 22, 2023

RegTools: Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer

Kelsy C. Cotto, Yang-Yang Feng, Avinash Ramu…·Malachi Griffith

RegTools identifies splice-associated variants in cancer by integrating genomic and transcriptomic data across 9,000 tumor samples, discovering 235,778 splicing events.

131 citationstop 1%

humanwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsCancer Immunology ResearchPeer-reviewedJan 6, 2020

pVACtools: a computational toolkit to identify and visualize cancer neoantigens

Jasreet Hundal, Susanna Kiwala, Joshua F. McMichael…·Malachi Griffith

pVACtools provides a suite of tools for neoantigen prediction, prioritization, and vaccine design in cancer immunotherapy.

305 citationstop 1%

whole-exome sequencingstatistical model

𝕏 PostBluesky