Author

Sydney C. Pimentel

New York UniversityORCID 0000-0003-2634-4322Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Organism:human· 1 Assay:Ribo-seq· 1 Organism:yeast· 1

Frequent Co-Authors

Heather E. UptoniD· 2 shared Kathleen CollinsiD· 2 shared Lucas FergusoniD· 2 shared Nicholas T. IngoliaiD· 2 shared Amanda MokiD· 1 shared Chris Jeans· 1 shared Liana F. LareauiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

Heather E. UptonORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BiochemistryRNAPeer-reviewedDec 3, 2024

Improved precision, sensitivity, and adaptability of Ordered Two-Template Relay cDNA library preparation for RNA sequencing

Lucas Ferguson, Heather E. Upton, Sydney C. Pimentel…·Kathleen Collins

The paper improves the OTTR method for RNA sequencing by reducing bias and increasing precision in capturing RNA sequences from degraded or processed RNAs.

5 citations

bulk RNA-seqexperimental assay

𝕏 PostBluesky

Molecular BiologyNature MethodsPeer-reviewedOct 2, 2023

Streamlined and sensitive mono- and diribosome profiling in yeast and human cells

Lucas Ferguson, Heather E. Upton, Sydney C. Pimentel…·Nicholas T. Ingolia

The paper introduces a streamlined ribosome profiling method using P1 nuclease and Ordered Two-Template Relay, improving sensitivity and reducing bias in yeast and human cells.

62 citationstop 2%

yeasthuman

𝕏 PostBluesky