Yang Bai

The paper introduces CIM, a method to predict CFM-Rec interactions from genomic data, revealing topological patterns in microbial communities.

The paper shows that a natural soil microbiota controls nitrogen form and plant mineral nutrition by modulating nitrification and nutrient availability.

This study identifies bacterial isolates capable of degrading indole-3-acetic acid (IAA) from Arabidopsis and rice roots, revealing their functional roles and association with IAA producers.

The paper identifies PPAR as a potential therapeutic target for small-for-size syndrome by analyzing transcriptomic changes after extended hepatectomy in rats.

Rbec is a tool for analyzing amplicon sequencing data from synthetic microbial communities, correcting errors and detecting polymorphisms and contaminants.

The paper benchmarks computational metagenomics software using complex datasets, showing strengths and limitations in assembly, binning, and taxonomic profiling.