Author

Carl D. Green

King Abdullah University of Science and TechnologyORCID 0000-0003-2952-3908Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Andrea ZuccoloiD· 2 shared Dmytro ChebotaroviD· 2 shared Doreen WareiD· 2 shared Jianwei ZhangiD· 2 shared Kapeel M. ChouguleiD· 2 shared Kenneth L. McNallyiD· 2 shared Luis F. RiveraiD· 2 shared Manjula ThimmaiD· 2 shared

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2023-2023 · peak 2/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Andrea ZuccoloORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintJun 25, 2023

HPC-based genome variant calling workflow (HPC-GVCW)

Yong Zhou, Nagarajan Kathiresan, Zhichao Yu…·Rod A. Wing

The paper presents an HPC-based workflow for genome variant calling using GATK, demonstrating SNP detection in four plant species and identifying novel SNPs in rice.

1 citation

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedMar 21, 2023

Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice (Oryza sativa)

Yong Zhou, Zhichao Yu, Dmytro Chebotarov…·Rod A. Wing

The paper constructs a pan-genome inversion index for Asian rice using 16 genomes and finds a high inversion rate with functional implications.

86 citationstop 1%

plant (other)whole-genome sequencing

𝕏 PostBluesky