Yong Zhou

The paper presents a gap-free, telomere-to-telomere genome assembly for date palm and 19 high-quality assemblies, revealing chromosomal structures and sex determination regions.

The paper presents 11 new chromosome-level genome assemblies of Oryza species, revealing core genome conservation and subgenome plasticity, and highlights implications for crop improvement.

The paper develops a pan-gene catalogue for Asian cultivated rice by creating a reference panel of 16 cultivars and identifying core and cultivar-specific genes.

This study uses genome editing to improve Hassawi rice traits for sustainable cultivation, resulting in shorter growth cycles, increased productivity, and better nutritional attributes.

The paper presents an HPC-based workflow for genome variant calling using GATK, demonstrating SNP detection in four plant species and identifying novel SNPs in rice.

The paper introduces RGI, a pan-genome database for Asian rice, integrating 16 reference genomes and transcriptome data to provide gene information and visualization tools.

The paper constructs a pan-genome inversion index for Asian rice using 16 genomes and finds a high inversion rate with functional implications.

The paper presents two gap-free rice genomes, revealing centromere structure and gene expression insights.

The paper generates 12 new high-quality rice reference genomes to expand the genetic diversity coverage of cultivated rice, forming a comprehensive pan-genome resource with 16 reference sequences.