Author

Weixin Wu

University of California San DiegoORCID 0000-0003-3062-6787Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Sheng ZhongiD· 3 shared Riccardo CalandrelliiD· 2 shared Tri C. NguyeniD· 2 shared Xingzhao WeniD· 2 shared Zhangming YaniD· 2 shared Zhen CheniD· 2 shared Bing ReniD· 1 shared Chien-Ju CheniD· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersGenomics

Sheng ZhongORCID

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3 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedOct 16, 2023

Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells

Riccardo Calandrelli, Xingzhao Wen, John Lalith Charles Richard…·Sheng Zhong

This study investigates how chromatin-associated RNA interacts with 3D genome organization in human cells, revealing a feedback loop between RNA distribution and chromatin structure.

57 citationstop 3%

humanChIP-seq

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GenomicsbioRxivPreprintJul 24, 2019

Dynamic changes in RNA-chromatin interactome promote endothelial dysfunction

Riccardo Calandrelli, Lixia Xu, Yingjun Luo…·Sheng Zhong

The paper investigates how RNA-chromatin interactions change in endothelial cells under high-glucose and TNF treatment, showing their role in inflammation and endothelial dysfunction.

1 citation

humanscRNA-seq

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GenomicsProceedings of the National Academy of SciencesPeer-reviewedFeb 4, 2019

Genome-wide co-localization of RNA-DNA interactions and fusion RNA pairs

Zhangming Yan, Norman Huang, Weixin Wu…·Sheng Zhong

The paper identifies a correlation between RNA-DNA interactions in normal cells and fusion RNA pairs in cancer, suggesting a mechanism for fusion transcript formation.

75 citations

humanbulk RNA-seq

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