Author

Reed S. Shabman

American Type Culture CollectionORCID 0000-0003-3272-3484Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:Arabidopsis· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Adam M. PhillippyiD· 1 shared Andrew I. SuiD· 1 shared Benjamin D. RoseniD· 1 shared Candice Czech· 1 shared Chunlei WuiD· 1 shared David BrowniD· 1 shared Derek M. HarkinsiD· 1 shared Françoise Thibaud‐NisseniD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Adam M. PhillippyORCID

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2 papers

Recent·Most cited

BioinformaticsScientific DataPeer-reviewedFeb 23, 2023

Developing a standardized but extendable framework to increase the findability of infectious disease datasets

Ginger Tsueng, Marco Alvarado Cano, José Bento…·Serdar Turkarslan

The paper develops a metadata schema based on Schema.org to improve the findability of infectious disease datasets and computational tools across repositories.

18 citations

statistical modelbenchmark study

𝕏 PostBluesky

GenomicsGigaSciencePeer-reviewedJan 10, 2018

Analysis of the Aedes albopictus C6/36 genome provides insight into cell line adaptations to in vitro viral propagation

Jason Rafe Miller, Sergey Koren, Kari A. Dilley…·Reed S. Shabman

The paper presents an annotated genome assembly of the Aedes albopictus C6/36 cell line, revealing genetic features and gene expression patterns relevant to viral propagation.

68 citationstop 2%

Arabidopsisbulk RNA-seq

𝕏 PostBluesky