Author
Chan Zuckerberg Initiative (United States)ORCID 0000-0003-3438-3559Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
3 papers
Recent·Most cited
James D. Pearce, Sara E. Simmonds, Gita Mahmoudabadi…·Theofanis Karaletsos
The paper introduces TranscriptFormer, a generative model trained on 112 million cells across 12 species, demonstrating cross-species cell type classification and disease state prediction.
Ryan Lorig-Roach, Melissa Meredith, Jean Monlong…·Benedict Paten
The paper introduces methods for haplotype-resolved de novo assembly using Shasta and GFAse, showing improved assembly quality with newer Oxford Nanopore reads.
Sara E. Simmonds, Lynn Ly, John Beaulaurier…·Katrina Kalantar
CZ ID introduces a long-read metagenomic analysis pipeline, benchmarked against Kraken2, for virus detection and antimicrobial resistance gene identification.