Author

Julia M. Michalska

Institute of Science and Technology AustriaORCID 0000-0003-3862-1235Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:imaging· 2 Organism:mouse· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Julia LyudchikiD· 3 shared Alban Cenameri· 2 shared Christoph SommeriD· 2 shared Gaia NovarinoiD· 2 shared Jake F. WatsoniD· 2 shared Johann Georg DanzliD· 2 shared Péter JónásiD· 2 shared Philipp VelickyiD· 2 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersNeuroscience

Julia LyudchikORCID

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3 papers

Recent·Most cited

NeurosciencebioRxivPreprintSep 26, 2025

Combinatorial protein barcodes enable self-correcting neuron tracing with nanoscale molecular context

Sung Yun Park, Arlo Sheridan, Bobae An…·Andrew C. Payne

The paper introduces PRISM, a platform that uses combinatorial protein barcodes to enable self-correcting neuron tracing with molecular context, improving tracing accuracy and handling spatial gaps.

6 citations

mousespatial transcriptomics

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NeuroscienceNature MethodsPeer-reviewedJul 10, 2023

Saturated reconstruction of living brain tissue

Philipp Velicky, Eder Miguel, Julia M. Michalska…·Johann Georg Danzl

This paper introduces a method for saturated reconstruction of living brain tissue using advanced imaging and deep learning to achieve high-resolution, volumetric analysis of neural structures over time.

48 citationstop 3%

imagingdeep learning

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NeurosciencebioRxivPreprintAug 17, 2022

Uncovering brain tissue architecture across scales with super-resolution light microscopy

Julia M. Michalska, Julia Lyudchik, Philipp Velicky…·Johann Georg Danzl

The paper introduces CATS, a method to map brain tissue architecture across scales, demonstrating its application to hippocampal mossy fiber circuitry.

7 citations

humanmouse

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