Author

Maha Shady

Broad InstituteORCID 0000-0003-4060-7686Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Eliezer M. Van AlleniD· 2 shared Brendan Michael ReardoniD· 1 shared Doris FuiD· 1 shared Erica Maria PimentaiD· 1 shared Erik L. BaoiD· 1 shared Hyeji JuniD· 1 shared J ParkiD· 1 shared Jingxin FuiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersCancer Biology

Eliezer M. Van AllenORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintJun 9, 2026

Evaluating agentic AI for biological discovery in autonomous and copilot settings

Shreya Johri, Erica Maria Pimenta, Josephine Yates…·Eliezer M. Van Allen

This study evaluates agentic AI's ability to support biological discovery in autonomous and human-AI copilot settings using multi-omic cancer datasets.

DOI 10.64898/2026.06.04.729919

humanmultiome

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Cancer BiologybioRxivPreprintOct 2, 2025

Segregating DNA lesions point to high selective advantage of tumor initiating cells

Vladimir B. Seplyarskiy, Maha Shady, Maria A. Andrianova…·Shamil R. Sunyaev

The paper uses DNA lesion segregation to estimate tumor initiating events and shows early cancer drivers have a fitness advantage exceeding 30%.

1 citation

mousehuman

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